Software.
sceptr (author, maintainer): SCEPTR (Simple Contrastive Embedding of the Primary sequence of T cell Receptors) is a small and fast TCR langauge model that produces highly informative TCR embeddings for accurate downstream TCR specificity prediction and clustering.
tidytcells (author, maintainer): A lightweight Python package that cleans and standardizes T cell receptor (TR), Major Histocompatibility (MH), and Immunoglobulin (IG) data to be IMGT-compliant.
nearust (author, maintainer): A tool for fast detection of similar strings.
smark.nvim (author, maintainer): A smart, Prettier-compatible Markdown auto-bullet list plugin for NeoVim.
pyrepseq (contributor): A Python library that provides algorithms and visualization tools to speed up the analysis of immune repertoire sequencing data.